As the temperature increases, the kinetic energy increases which

As the temperature increases, the kinetic energy increases which causes increasing molecular motion and find more thereby breaking

the weak interactions and hence, reducing non-specific DNA hybridization. There must be a trade-off between raising the temperature to eliminate non-specific binding and the temperature effect on the specific binding. This is an aspect that needs to be kept under control. However, it does not seem to be a problem at temperatures below 50 °C as were used in this study. Hybridization of 50-mer oligo-G with immobilized 25-mer oligo-C on the electrode surface was initially performed. Subsequently, another 25-mer oligo-C was injected to the system at the same concentration

as that of oligo-G. This resulted in a higher capacitive response as compared to response from hybridization of 50-mer oligo-G alone to the sensor surface (Fig. 6). In this study, the 50-mer oligo-G was expected to be long enough to give the intrinsic bending behavior, but also to experience higher attraction force towards the electrode surface than others (25- and 15-mer). For example, the signal from the 50-mer oligo-G at concentration of 10−8 M was lower than expected, 78-nF cm−2, but after subsequent injection of the same concentration of the shorter 25-mer oligo-C, the hybridization of partial bent oligo-G with oligo-C occurs, resulting in further C59 wnt nmr increase of capacitance change to 114-nF cm−2. The subsequent injected short complementary oligonucleotide hybridized

with bases from a partially bent long oligonucleotide molecule, and resulted in an amplification of the signal, which has indicated that the diffuse mobile layer was even further displaced from the surface of the gold electrode due to hybridization of DNA molecules. Increasing in signal strength could lead to an increase in sensitivity of an analytical device too. However, in some cases, signal strength is somewhat not very important when improving sensitivity of an analytical device; because from the signal can be very big but the detection limit cannot be very good due to poor signal to noise level. The application of polymer chemistry (polytyramine) for insulation of a gold electrode surface and immobilization of oligo-nucleotides to that surface is a simple and repeatable method for DNA based sensors. This work has demonstrated that the capacitance change, ΔC, is proportional to the concentration of and the length of the hybridized oligo-G for the developed system. However, longer DNA molecules have to be treated differently. This was solved by using sandwich hybridization, which increased the amplitude of the signal. Non-specific hybridization was handled by elevating the temperature up to 50 °C, resulting in a tenfold decrease of the signal compared to RT.

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