We report recent extensions to this approach. Results: We have rebuilt the original

RNASHAPES as a repository of components that allows us to integrate several established tools for RNA structure analysis: RNASHAPES, RNAALISHAPES and PKNOTSRG, including its recent extension PKISS. As a spin-off, we obtain heretofore unavailable functionality: e.g. with PKISS, we can now perform abstract shape analysis for structures holding pseudoknots up to the complexity of kissing hairpin motifs. The new Ruboxistaurin tool PALIKISS can predict kissing hairpin motifs from aligned sequences. Along with the integration, the functionality of the tools was also extended in manifold ways.”
“Preterm birth has been shown to induce an altered developmental trajectory of brain structure and function. With the aid support vector machine (SVM) classification methods we aimed to investigate whether MRI data, collected in adolescence, could be used to predict whether an individual had been born preterm or at term. To this end we collected T1-weighted anatomical MRI data from 143 individuals (69 controls, mean age 14.6y). The inclusion criteria for those born preterm were birth weight smaller than = 1500g and gestational age smaller than 37w. A linear SVM was trained on the grey matter segment of MR images in

two different ways. First, all the individuals were used for training and classification was performed by the leave-one-out method, yielding 93%

correct LXH254 MAPK inhibitor classification (sensitivity = 0.905, specificity = 0.942). Separately, a random half of the available data were used for training twice and each time the other, unseen, half of the data was classified, resulting 86% and 91% accurate classifications. Both gestational age (R = -0.24, p smaller than 0.04) and birth weight (R = -0.51, p smaller than 0.001) correlated with the distance to decision boundary within the group of individuals born preterm. Rapamycin Statistically significant correlations were also found between IQ (R = -0.30, p smaller than 0.001) and the distance to decision boundary. Those born small for gestational age did not form a separate subgroup in these analyses. The high rate of correct classification by the SVM motivates further investigation. The long-term goal is to automatically and non-invasively predict the outcome of preterm-born individuals on an individual basis using as early a scan as possible.”
“BackgroundHand eczema (HE) severely impairs patients’ quality of life, and causes significant psychological and social distress. There has been little focus on how people with HE perceive their disease and how they may be adapting their behaviours to cope with their condition.